Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015852570.1_cds_XP_016511898.1_24593
CDS Infomation

[gene=LOC107829003] [db_xref=GeneID:107829003] [protein=diphthamide biosynthesis protein 2-like] [protein_id=XP_016511898.1] [location=join(12013..12093,12982..13205,13304..13412,13849..14188,14704..14773,14891..14958,15081..15196,15283..15389,17444..17580,18101..18342)] [gbkey=CDS]
Sequence

ATGGACTTGGAGTCAGTTTACGAAATTGACCTTGTCGCCGGATTCATCTCCGGTAAAGGC
TTCCGCCGAGTTGCTCTTCAGTTCCCTGATGAACTATTGAAAGATTCAACGAGGATAGTG
TCTGCTCTACATGAAAAACTTCGCTTATTCAACCAGTTACATACTGGAAGTAATGGAGAT
GCAAAGGATGTTAGGCTGTATGTAATGGCGGACACTACGTATGGAAATTGCTGTGTTGAT
GAAGTTGGAGCATCTCATGTCAACACGGACTGCGTTATCCATTATGGTCATACTTGCTTC
AGTCCGACATCGACTCTTCCCGCTTTTTTTGTCCTTGGGAAAGCTTCACTAAATGTGCCA
CTTTGTGCTCAAAAGCTTTGCGAGTATACAATAAAAGCCGGCAAACCTATTTTGGTTCTT
TATGGGCTTGAATATGCACATGCAATCACAGAAATCAAAGCATCAGTTGGTACTCAATCA
TGCTTCAAAGTGGAATTTTGTTATGCTGATACTATGTCTCCAGTTATAACTCCATCAGAA
ACTTTTTGCTCAATGAATGGGCAACCAAAACTAAGTGATGGTCAATGTGCAAATAGCTGT
ACTACTGAGGAGAACAATGCACCATATCGTATTGGAGGGTTGACGTGGTCGTTACCTGTG
GGACACAGGATTGAGGACTATTTACTTTTCTATGTTGGTTCAGATGACTCAGCCTTTGCA
AATATATCAATGACATACAATACTTGTGAAATAGTCAGATATGATGCTACGGAAGACCTT
TTGGTGAATGACTTTTCTCAGCAGAAAAGGATTCTTAAGCGTAGGTACTTTCTTATTGAG
AAAGCAAAAGATGCTAGCATCATAGGGATCTTGGTAGGGACACTTGGAGTAGCTGGTTAC
CTCCACATGATTCATCAGATGAAAGACTTGATTACCCGAGCTGGGAAGAAAGCCTATACT
TTTGTTATGGGGAGACCTAACCCTGCAAAACTTGCCAACTTTCCTGAGTGCGATGTCTTC
ATTTATGTTTCTTGTGCACAAACTGCTCTATTGGATAGTAAAGAGTTCTTAGCTCCAGTT
ATTACTCCTTTTGAAGCAATGATTGCTTTCGGCAGAGGAAGTGAATGGACTGGGGCTTAT
GTAACCGAGTTTCGGGATTTGATTACTTCTTCCCCCATGGAAGTGAAAGACCAGTCAGAA
GCACGATTTTCTTTCATTGAGGGTGGATATGTGGAAGATTTTGAGCAGCAAGATGTCGAA
GAAGATGTCGAAGATGGAGTTTCTGCTTTAGTGAACATCACAGAGAAGGCTCTGCATGTT
CGTGACAAGGCCACTCATTCTCTAATGAATGGAACAGCTAAATCTGGGGCAGAGTACTTC
GCAGCTAGGTCGTTTCACGGCCTTGACATTCATACTGAAAATAATTTTCCCGAGCCATTT
TTAATTGGTAAAAGTGGGAGAGCATCAGGGTACAAGAATGAGACTACAGAGTAA

Peptide Sequence

PEP ID

XP_016511898.1
PEP Infomation

PREDICTED: diphthamide biosynthesis protein 2-like [Nicotiana tabacum]
Sequence

MDLESVYEIDLVAGFISGKGFRRVALQFPDELLKDSTRIVSALHEKLRLFNQLHTGSNGD
AKDVRLYVMADTTYGNCCVDEVGASHVNTDCVIHYGHTCFSPTSTLPAFFVLGKASLNVP
LCAQKLCEYTIKAGKPILVLYGLEYAHAITEIKASVGTQSCFKVEFCYADTMSPVITPSE
TFCSMNGQPKLSDGQCANSCTTEENNAPYRIGGLTWSLPVGHRIEDYLLFYVGSDDSAFA
NISMTYNTCEIVRYDATEDLLVNDFSQQKRILKRRYFLIEKAKDASIIGILVGTLGVAGY
LHMIHQMKDLITRAGKKAYTFVMGRPNPAKLANFPECDVFIYVSCAQTALLDSKEFLAPV
ITPFEAMIAFGRGSEWTGAYVTEFRDLITSSPMEVKDQSEARFSFIEGGYVEDFEQQDVE
EDVEDGVSALVNITEKALHVRDKATHSLMNGTAKSGAEYFAARSFHGLDIHTENNFPEPF
LIGKSGRASGYKNETTE

Transcript Sequence

Gene sequence data has not been registered.